STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDE1nudE neurodevelopment protein 1. (342 aa)    
Predicted Functional Partners:
LOC115396025
Lissencephaly-1 homolog A.
    
 0.852
PAFAH1B1
Lissencephaly-1 homolog.
    
 0.852
zhx2
Zinc fingers and homeoboxes 2.
    
 0.789
ENSSFAP00005025940
Kinesin family member 19.
    
 0.763
kif20a
Kinesin family member 20A.
    
 0.761
kif23
Kinesin family member 23.
    
  0.755
nudc
Nuclear distribution C, dynein complex regulator.
     
 0.755
kif22
Kinesin family member 22.
     
 0.745
kif3a
Kinesin family member 3A.
     
 0.744
ENSSFAP00005038673
Kinesin family member 21B.
     
 0.737
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.