STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115387357Mitochondrial Rho GTPase 1-A. (721 aa)    
Predicted Functional Partners:
pink1
PTEN induced kinase 1.
    
 0.935
ENSSFAP00005013529
Intersectin 2b.
    
 0.888
ENSSFAP00005029100
Intersectin 2a.
    
 0.888
ENSSFAP00005034123
annotation not available
    
 0.856
rhot2
Ras homolog family member T2.
  
  
 
0.833
ENSSFAP00005009826
WD repeat domain 90.
 
 
 0.831
ENSSFAP00005011377
Ras homolog family member T1.
  
  
 
0.831
trak2
Trafficking kinesin protein 2.
    
 0.809
myo19
Myosin XIX.
    
 0.790
ENSSFAP00005008439
Trafficking protein, kinesin binding 1a.
    
 0.776
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.