STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manbaMannosidase beta. (879 aa)    
Predicted Functional Partners:
gale
UDP-galactose-4-epimerase.
  
 
 0.931
galm
Galactose mutarotase.
  
 
 0.922
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.912
naga
alpha-N-acetylgalactosaminidase.
     
 0.888
gla
Galactosidase alpha.
     
 0.888
sord
Sorbitol dehydrogenase.
 
 
 0.871
gba
Glucosylceramidase beta.
  
 
 0.861
ENSSFAP00005018767
Transmembrane protein 130.
  
 
 0.861
sgsh
N-sulfoglucosamine sulfohydrolase.
  
 0.859
cmbl
Carboxymethylenebutenolidase homolog.
    
  0.842
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.