STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gria2Glutamate ionotropic receptor AMPA type subunit 2. (898 aa)    
Predicted Functional Partners:
LOC115386949
Voltage-dependent calcium channel gamma-4 subunit-like.
    
 0.938
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
    
 0.938
pick1
Protein interacting with PRKCA 1.
    
 0.923
ENSSFAP00005002108
Calcium channel, voltage-dependent, gamma subunit 3b.
   
 0.910
LOC115390562
Voltage-dependent calcium channel gamma-2 subunit-like.
   
 0.910
ENSSFAP00005019365
Glutamate receptor interacting protein 1.
    
 0.902
ENSSFAP00005033784
Glutamate receptor interacting protein 2b.
    
 0.902
ENSSFAP00005014879
Cornichon family AMPA receptor auxiliary protein 3.
    
 0.862
ENSSFAP00005033261
Calcium channel, voltage-dependent, gamma subunit 8b.
    
 0.862
ENSSFAP00005039010
Cornichon family AMPA receptor auxiliary protein 2.
    
 0.862
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.