STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A2Collagen type VI alpha 2 chain. (917 aa)    
Predicted Functional Partners:
ENSSFAP00005036720
Collagen, type VI, alpha 1.
  
0.956
COL6A1
Collagen type VI alpha 1 chain.
  
0.955
itga1
Integrin subunit alpha 1.
   
 0.845
ENSSFAP00005005934
Integrin, beta 6.
    
 0.842
itgb5
Integrin subunit beta 5.
    
 0.842
ENSSFAP00005037588
Integrin, beta 4.
    
 0.842
ENSSFAP00005052538
Integrin, beta 1a.
    
 0.840
ITGB1
Integrin beta-1-like.
    
 0.840
ENSSFAP00005011471
Integrin, alpha 10.
   
 0.836
itga2
Integrin subunit alpha 2.
   
 0.836
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.