STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2zUbiquitin conjugating enzyme E2 Z. (392 aa)    
Predicted Functional Partners:
LOC115389173
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 0.997
trip12
Thyroid hormone receptor interactor 12.
   
 0.937
ENSSFAP00005027740
annotation not available
    
 0.903
ubox5
U-box domain containing 5.
   
 0.895
atp5f1c
ATP synthase F1 subunit gamma.
   
 
  0.892
rnf40
Ring finger protein 40.
   
 0.875
ENSSFAP00005047938
Ring finger protein 20, E3 ubiquitin protein ligase.
   
 0.875
LOC115403792
ranBP2-like and GRIP domain-containing protein 3.
   
 0.868
gabarap
GABA type A receptor-associated protein.
   
 0.857
LOC115397050
Gamma-aminobutyric acid receptor-associated protein-like 1.
   
 0.857
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.