STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDSUB1WD repeat, sterile alpha motif and U-box domain containing 1. (479 aa)    
Predicted Functional Partners:
ENSSFAP00005018647
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.996
ttc37
Tetratricopeptide repeat domain 37.
    
 0.900
ENSSFAP00005042438
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 0.898
cdc73
Cell division cycle 73.
    
 0.873
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.852
ddx20
DEAD-box helicase 20.
   
 0.806
ddb1
Damage specific DNA binding protein 1.
    
 0.800
hbs1l
HBS1 like translational GTPase.
    
 0.783
strap
Serine/threonine kinase receptor associated protein.
  
 
 0.782
ipo8
Importin 8.
    
 0.767
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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