STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115387697PDZ domain-containing protein GIPC1-like. (337 aa)    
Predicted Functional Partners:
ENSSFAP00005007192
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
 0.834
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
   
 
 0.834
LOC115401391
Unconventional myosin-VI-like.
    
 
 0.818
ENSSFAP00005035319
Myosin VIb.
    
 
 0.818
NRP1
Neuropilin-1a-like.
    
 
 0.646
nrp1
Neuropilin 1.
    
 
 0.561
LOC115397854
Putative claudin-24.
    
  0.546
cdk18
Cyclin dependent kinase 18.
    
  0.546
cdk2
Cyclin dependent kinase 2.
    
  0.546
cdk4
Cyclin dependent kinase 4.
    
  0.546
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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