STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115383243BRCA1-A complex subunit Abraxas 1-like. (347 aa)    
Predicted Functional Partners:
ENSSFAP00005021425
annotation not available
    
  0.861
LOC115382154
BRISC and BRCA1-A complex member 1-like.
    
  0.858
brca1
BRCA1 DNA repair associated.
    
  0.852
babam2
BRISC and BRCA1 A complex member 2.
    
  0.685
ENSSFAP00005020106
annotation not available
    
  0.635
uimc1
Ubiquitin interaction motif containing 1.
   
 
  0.619
ENSSFAP00005021420
annotation not available
    
  0.614
YTHDC2
YTH domain containing 2.
    
  0.584
ENSSFAP00005002265
annotation not available
    
  0.576
ENSSFAP00005013372
annotation not available
    
  0.576
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.