STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005040264Thymopoietin a. (455 aa)    
Predicted Functional Partners:
LOC115395381
Barrier-to-autointegration factor.
    
 0.786
LOC115385604
lamin-B2-like.
   
 0.701
LOC115409625
lamin-A-like.
   
 0.701
LOC115386863
lamin-L(III)-like.
   
 0.701
lmna
Lamin A/C.
   
 0.701
lmnb1
Lamin B1.
   
 0.701
ENSSFAP00005035799
annotation not available
    
 0.695
arid4b
AT-rich interaction domain 4B.
    
 0.695
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.654
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.642
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.