STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115398401Calcium-binding protein 7-like. (215 aa)    
Predicted Functional Partners:
ENSSFAP00005008488
Myosin IIIA.
   
 0.829
ENSSFAP00005048648
Myosin IIIB.
   
 0.829
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.808
LOC115383677
Peripheral plasma membrane protein CASK-like.
    
 0.808
ENSSFAP00005009826
WD repeat domain 90.
   
 
 0.677
GRIN1
Glutamate receptor ionotropic, NMDA 1-like.
   
 0.662
LOC115383279
Glutamate receptor ionotropic, NMDA 1.
   
 0.662
ENSSFAP00005012731
Xeroderma pigmentosum, complementation group C.
    
 0.655
LOC115385724
Peroxisomal NADH pyrophosphatase NUDT12-like.
    
  0.654
LOC115398668
Peroxisomal NADH pyrophosphatase NUDT12-like.
    
  0.654
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.