STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115397801Transmembrane protein 17A-like. (222 aa)    
Predicted Functional Partners:
ENSSFAP00005000721
B9 protein domain 1.
    
 0.933
ENSSFAP00005035810
Coiled-coil and C2 domain containing 2A.
    
 0.932
ENSSFAP00005010834
annotation not available
   
 
 0.923
ENSSFAP00005013766
Transmembrane protein 67.
     
 0.919
mks1
MKS transition zone complex subunit 1.
     
 0.913
tctn3
Tectonic family member 3.
     
 0.913
TMEM107
Transmembrane protein 107.
     
 0.908
LOC115388605
B9 domain-containing protein 2.
    
 0.845
LOC115388605-2
B9 domain-containing protein 2.
    
 0.845
LOC115391561
Transmembrane protein 231-like.
    
 0.844
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.