STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115383690ETS translocation variant 5-like. (508 aa)    
Predicted Functional Partners:
cop1
COP1 E3 ubiquitin ligase.
    
 
 0.701
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 
 0.695
LOC115390154
Serum response factor-like.
    
 0.689
SRF
Serum response factor.
    
 0.689
stk40
Serine/threonine kinase 40.
    
   0.679
LOC115385070
Runt-related transcription factor 1-like.
   
 0.621
LOC115406385
Runt-related transcription factor 3-like.
   
 0.621
runx2
RUNX family transcription factor 2.
   
 0.621
LOC115399424
Runt-related transcription factor 3-like.
   
 0.620
LOC115399302
Mitogen-activated protein kinase 8-like.
    
 0.619
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (14%) [HD]