STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tut1Terminal uridylyl transferase 1, U6 snRNA-specific. (785 aa)    
Predicted Functional Partners:
ENSSFAP00005051309
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 0.958
cpsf2
Cleavage and polyadenylation specific factor 2.
   
 0.955
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.953
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.936
LOC115399036
Casein kinase I.
     
 0.930
nudt21
Nudix hydrolase 21.
   
 
 0.927
cstf1
Cleavage stimulation factor subunit 1.
   
 
 0.926
zc3h3
Zinc finger CCCH-type containing 3.
    
  0.924
clp1
Cleavage and polyadenylation factor I subunit 1.
     
 0.922
LOC115385402
Cleavage and polyadenylation specificity factor subunit 3-like.
    
 0.919
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.