STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc2hc1aZinc finger C2HC-type containing 1A. (311 aa)    
Predicted Functional Partners:
ENSSFAP00005028373
Methyltransferase like 25.
    
 
 0.697
rufy3
RUN and FYVE domain containing 3.
      
 0.558
wdr59
WD repeat domain 59.
      
 0.532
LOC115382528
Protein FAM163B-like.
      
 0.532
parp16
poly(ADP-ribose) polymerase family member 16.
    
 
 0.528
rrnad1
Ribosomal RNA adenine dimethylase domain containing 1.
    
 
 0.528
zdhhc22
Zinc finger DHHC-type containing 22.
      
 0.521
ECHDC3
enoyl-CoA hydratase domain containing 3.
      
 0.457
wdr24
WD repeat domain 24.
      
 0.438
mcts1
MCTS1 re-initiation and release factor.
      
 0.435
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.