STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005042856Growth arrest-specific 1b. (244 aa)    
Predicted Functional Partners:
shh
Sonic hedgehog signaling molecule.
    
 0.901
dhh
Desert hedgehog signaling molecule.
    
 0.899
LOC115403569
Indian hedgehog B protein-like.
    
 0.887
ihh
Indian hedgehog signaling molecule.
    
 0.887
ptch1
Patched 1.
     
 0.881
ENSSFAP00005046623
Patched 2.
     
 0.881
cdon
Cell adhesion associated, oncogene regulated.
    
 0.872
boc
BOC cell adhesion associated, oncogene regulated.
    
 0.872
LOC115398580
Growth arrest-specific protein 1-like.
  
  
 
0.831
ENSSFAP00005047906
annotation not available
     
 0.734
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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