STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfb1mTranscription factor B1, mitochondrial. (347 aa)    
Predicted Functional Partners:
ENSSFAP00005031330
Polymerase (RNA) mitochondrial (DNA directed).
   
 0.992
bysl
Bystin like.
   
 0.991
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.986
wdr3
WD repeat domain 3.
   
  0.985
nol6
Nucleolar protein 6.
   
  0.981
bms1
BMS1 ribosome biogenesis factor.
   
  0.976
utp18
UTP18 small subunit processome component.
   
  0.976
utp6
UTP6 small subunit processome component.
   
  0.975
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
  
 0.972
pus1
Pseudouridine synthase 1.
   
  0.972
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.