STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115383677Peripheral plasma membrane protein CASK-like. (935 aa)    
Predicted Functional Partners:
ENSSFAP00005012794
Erythrocyte membrane protein band 4.1 like 5.
   
 0.981
ENSSFAP00005014070
Erythrocyte membrane protein band 4.1 like 4B.
   
 0.981
rims2
Regulating synaptic membrane exocytosis 2.
   
 0.981
ENSSFAP00005031220
annotation not available
   
 0.981
ENSSFAP00005001555
Lin-7 homolog C (C. elegans).
    
 0.980
ENSSFAP00005001627
Lin-7 homolog C (C. elegans).
    
 0.980
APBA1
Amyloid beta precursor protein binding family A member 1.
   
 0.980
lin7b
Lin-7 homolog B, crumbs cell polarity complex component.
    
 0.980
ENSSFAP00005044228
Amyloid beta (A4) precursor protein-binding, family A, member 2a.
   
 0.980
ENSSFAP00005051261
Lin-7 homolog A (C. elegans).
    
 0.980
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.