STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115400333Matrilysin-like. (458 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.849
LOC115389173
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 
  0.829
timp2
TIMP metallopeptidase inhibitor 2.
   
 0.803
LOC115387438
Metalloproteinase inhibitor 2-like.
   
 0.802
mmp14
Matrix metallopeptidase 14.
  
 
0.721
mmp9
Matrix metallopeptidase 9.
   
0.710
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.685
LOC115406037
Proheparin-binding EGF-like growth factor.
    
  0.673
ENSSFAP00005009426
Vascular endothelial growth factor Aa.
     
 0.664
ENSSFAP00005026903
Endothelin 1.
     
 0.664
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.