STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005045534POU class 2 homeobox 1b. (631 aa)    
Predicted Functional Partners:
sp1
Sp1 transcription factor.
    
 0.750
ENSSFAP00005018835
annotation not available
    
  0.746
ENSSFAP00005037257
annotation not available
    
 
 0.730
ENSSFAP00005027202
E1A binding protein p300 b.
   
 0.700
ENSSFAP00005041950
Zinc finger protein 143b.
    
  0.659
gtf2b
General transcription factor IIB.
    
 0.657
gtf2e1
General transcription factor IIE subunit 1.
    
  0.654
polr3k
RNA polymerase III subunit K.
     
 0.646
LOC115381920
Transcription factor AP-1-like.
    
 0.638
tbp
TATA-box binding protein.
   
 0.635
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.