STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115400210capZ-interacting protein-like. (319 aa)    
Predicted Functional Partners:
washc1
WASH complex subunit 1.
    
 0.979
washc3
WASH complex subunit 3.
    
 0.975
washc5
WASH complex subunit 5.
   
 0.973
washc4
WASH complex subunit 4.
   
 0.970
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.929
tbc1d23
TBC1 domain family member 23.
     
 0.846
ENSSFAP00005040127
VPS35 retromer complex component.
    
 
 0.743
ENSSFAP00005027277
VPS29 retromer complex component.
    
 
 0.714
ENSSFAP00005047586
DNA topoisomerase II binding protein 1.
    
 0.692
ENSSFAP00005003077
annotation not available
    
 0.643
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.