STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnps1RNA binding protein with serine rich domain 1. (293 aa)    
Predicted Functional Partners:
sap18
Sin3A associated protein 18.
   
 0.992
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.984
rbm8a
RNA binding motif protein 8A.
   
0.982
LOC115389685
Eukaryotic initiation factor 4A-III.
   
 0.979
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.979
LOC115386241
Apoptotic chromatin condensation inducer in the nucleus-like.
   
 0.978
ENSSFAP00005031894
annotation not available
   
 0.978
ENSSFAP00005051309
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 0.967
LOC115381472
Regulator of nonsense transcripts 1.
    
 0.956
LOC115405973
Regulator of nonsense transcripts 1-like.
    
 0.956
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.