STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHLHE40-2Class E basic helix-loop-helix protein 40-like. (432 aa)    
Predicted Functional Partners:
bhlhe41
Basic helix-loop-helix family member e41.
  
0.883
ENSSFAP00005016719
FA complementation group C.
    
  0.693
fancl
FA complementation group L.
    
  0.693
fancf
FA complementation group F.
    
  0.693
ENSSFAP00005038845
FA complementation group G.
    
  0.693
ENSSFAP00005050450
FA complementation group E.
    
  0.672
rpl10a
Ribosomal protein L10a.
    
  0.672
nutf2
Nuclear transport factor 2.
    
  0.654
ENSSFAP00005016798
Mitochondrial ribosomal protein L1.
    
  0.654
LOC115409602
Nuclear transport factor 2-like.
    
  0.654
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.