STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115381892Hepatocyte nuclear factor 6-like. (450 aa)    
Predicted Functional Partners:
ENSSFAP00005015399
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 
 0.536
ENSSFAP00005035704
Recombination signal binding protein for immunoglobulin kappa J region a.
   
 
  0.512
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
 
  0.512
LOC115382576
cyclin-G2-like.
    
 
 0.453
CCNG2
cyclin-G2-like.
    
 
 0.453
galm
Galactose mutarotase.
      
 0.452
pdx1
Pancreatic and duodenal homeobox 1.
     
 0.435
ENSSFAP00005014043
Ferrochelatase.
      
 0.426
LOC115406642
Hepatocyte nuclear factor 3-beta.
  
 
 
 0.422
ENSSFAP00005031317
CREB binding protein b.
    
 0.418
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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