STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rc3h1Ring finger and CCCH-type domains 1. (1136 aa)    
Predicted Functional Partners:
ENSSFAP00005050466
CCR4-NOT transcription complex, subunit 1.
   
 
 0.857
f2
Coagulation factor II, thrombin.
    
  0.824
LOC115382589
Roquin-2-like.
  
 
  
0.809
mysm1
Myb like, SWIRM and MPN domains 1.
   
   0.783
cnot9
CCR4-NOT transcription complex subunit 9.
    
 
 0.728
cnot11
CCR4-NOT transcription complex subunit 11.
    
 
 0.712
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.690
ENSSFAP00005054038
Nuclear FMR1 interacting protein 2.
   
 
 0.651
ENSSFAP00005016643
5'-3' exoribonuclease 1.
   
 
 0.650
trappc10
Trafficking protein particle complex 10.
    
 
 0.630
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.