STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115398688E3 ubiquitin-protein ligase RNF165-like. (371 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.938
LOC115405979
Ubiquitin-like.
    
 0.920
ubb
Ubiquitin B.
    
  0.821
ENSSFAP00005040432
annotation not available
    
  0.821
LOC115397179
Ubiquitin-conjugating enzyme E2 D2.
   
 0.778
ENSSFAP00005017691
annotation not available
   
 0.778
LOC115397936
Ubiquitin-conjugating enzyme E2 D4.
   
 0.778
LOC115406767
Ubiquitin-conjugating enzyme E2 D2-like.
   
 0.778
LOC115399590
Ubiquitin-conjugating enzyme E2 D4-like.
   
 0.778
ube2t
Ubiquitin conjugating enzyme E2 T.
   
 0.760
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.