STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005047609Mitogen-activated protein kinase kinase kinase 13. (975 aa)    
Predicted Functional Partners:
ENSSFAP00005019785
Mitogen-activated protein kinase kinase 7.
    
0.901
mycbp2
MYC binding protein 2.
    
 0.848
casp9
Caspase 9.
     
 0.693
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
    
 
 0.568
casp2
Caspase 2.
     
 0.552
LOC115399342
Caspase-3-like.
     
 0.519
LOC115399326
Centromere protein U-like.
     
 0.519
casp6
Caspase 6.
     
 0.519
LOC115390644
Caspase-3-like.
     
 0.519
ENSSFAP00005037378
annotation not available
     
 0.519
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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