STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbs5Bardet-Biedl syndrome 5. (343 aa)    
Predicted Functional Partners:
ENSSFAP00005005436
Bardet-Biedl syndrome 9.
   
 0.988
bbs2
Bardet-Biedl syndrome 2.
    
 0.986
ENSSFAP00005005383
annotation not available
  
 
 0.979
ENSSFAP00005051080
Bardet-Biedl syndrome 1.
  
 
 0.979
ENSSFAP00005010643
Tetratricopeptide repeat domain 8.
   
 0.968
TTC8
Tetratricopeptide repeat domain 8.
   
 0.968
ENSSFAP00005020171
BBSome interacting protein 1.
   
 0.954
ENSSFAP00005054998
Bardet-Biedl syndrome 4.
    
 0.924
rbx1
Ring-box 1.
    
 0.801
LZTFL1
Leucine zipper transcription factor like 1.
   
 0.783
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.