STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uba5Ubiquitin like modifier activating enzyme 5. (405 aa)    
Predicted Functional Partners:
ufc1
Ubiquitin-fold modifier conjugating enzyme 1.
  
 
 
 0.985
trip12
Thyroid hormone receptor interactor 12.
    
 0.984
LOC115389173
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 
 0.980
ENSSFAP00005016461
Ubiquitin-fold modifier 1.
    
 
 0.979
ENSSFAP00005038500
annotation not available
  
 0.940
mocs3
Molybdenum cofactor synthesis 3.
     
0.921
ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
 0.902
ube2m
Ubiquitin conjugating enzyme E2 M.
    
 0.902
atg3
Autophagy related 3.
    
 0.893
gabarap
GABA type A receptor-associated protein.
   
 0.889
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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