STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim36Tripartite motif containing 36. (738 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.518
ENSSFAP00005032044
Cytoplasmic linker associated protein 2.
    
 
 0.493
zfand4
Zinc finger AN1-type containing 4.
    
  0.470
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.466
ENSSFAP00005003705
annotation not available
    
  0.462
ENSSFAP00005003711
annotation not available
    
  0.462
ENSSFAP00005003718
annotation not available
    
  0.462
ubb
Ubiquitin B.
    
  0.462
ENSSFAP00005018075
annotation not available
    
  0.462
ENSSFAP00005018128
annotation not available
    
  0.462
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.