STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggps1Geranylgeranyl diphosphate synthase 1. (329 aa)    
Predicted Functional Partners:
ENSSFAP00005041300
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.964
fdps
Farnesyl diphosphate synthase.
    
 0.955
mvd
Mevalonate diphosphate decarboxylase.
  
 0.952
idi1
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.936
LOC115407002
F-box only protein 30-like.
    
 0.927
FBXO40
F-box protein 40.
    
 0.927
LOC115402405
F-box only protein 30-like.
    
 0.927
pdss2
Decaprenyl diphosphate synthase subunit 2.
     
 0.921
ENSSFAP00005001347
Farnesyltransferase, CAAX box, alpha.
     
 0.920
pdss1
Decaprenyl diphosphate synthase subunit 1.
     
0.916
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.