STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm17RNA binding motif protein 17. (421 aa)    
Predicted Functional Partners:
ENSSFAP00005002548
Calcium homeostasis endoplasmic reticulum protein.
   
 0.994
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.992
ENSSFAP00005014574
Zgc:163098.
   
 0.976
SUGP1
SURP and G-patch domain containing 1.
   
 
 0.976
u2surp
U2 snRNP associated SURP domain containing.
   
 0.976
DHX15
DEAH-box helicase 15.
   
 0.974
DHX15-2
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.974
sf3a2
Splicing factor 3a subunit 2.
    
 0.974
LOC115383442
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.
   
 0.974
ddx46
DEAD-box helicase 46.
   
 0.970
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.