STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115381644Cytochrome c oxidase assembly factor 7. (230 aa)    
Predicted Functional Partners:
erlec1
Endoplasmic reticulum lectin 1.
   
 0.903
os9
OS9 endoplasmic reticulum lectin.
   
 0.903
derl1
Derlin 1.
   
 0.896
derl2
Derlin 2.
   
 0.896
ENSSFAP00005004369
annotation not available
    
 0.812
amfr
Autocrine motility factor receptor.
    
 0.791
LOC115401564
E3 ubiquitin-protein ligase synoviolin-like.
    
 0.791
rnf139
Ring finger protein 139.
    
 0.770
rnf145
Ring finger protein 145.
    
 0.770
LOC115406733
RING finger protein 145-like.
    
 0.770
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.