STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnf1aHNF1 homeobox A. (565 aa)    
Predicted Functional Partners:
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
    
 
 0.748
ENSSFAP00005022431
Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
    
 
 0.748
hnf4a
Hepatocyte nuclear factor 4 alpha.
   
 0.661
LOC115394439
Hepatocyte nuclear factor 4-gamma-like.
   
 0.661
LOC115400784
Forkhead box protein A2-like.
   
 
 0.642
ENSSFAP00005027202
E1A binding protein p300 b.
    
 
 0.491
ENSSFAP00005032012
Pancreas associated transcription factor 1a.
     
 0.467
ENSSFAP00005031317
CREB binding protein b.
    
 
 0.438
LOC115391157
CREB-binding protein-like.
    
 
 0.438
nr0b2
Nuclear receptor subfamily 0 group B member 2.
   
  
 0.425
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.