STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpkowG-patch domain and KOW motifs. (508 aa)    
Predicted Functional Partners:
dhx38
DEAH-box helicase 38.
   
 0.989
bud13
BUD13 homolog.
   
 
 0.974
prpf8
pre-mRNA processing factor 8.
    
 
 0.946
ENSSFAP00005015541
CWC27 spliceosome associated cyclophilin.
    
 0.939
ENSSFAP00005006533
CWC22 spliceosome associated protein homolog.
    
 0.929
ENSSFAP00005050902
Armadillo repeat containing 7.
   
   0.921
ENSSFAP00005051694
Peptidylprolyl isomerase (cyclophilin)-like 2.
    
 0.915
sf3b3
Splicing factor 3b subunit 3.
   
   0.900
srrm1
Serine and arginine repetitive matrix 1.
    
   0.878
ENSSFAP00005016689
Peptidylprolyl isomerase (cyclophilin)-like 3.
   
 0.823
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.