STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknox2PBX/knotted 1 homeobox 2. (478 aa)    
Predicted Functional Partners:
LOC115381379
pre-B-cell leukemia transcription factor 1.
    
0.742
ENSSFAP00005013659
annotation not available
    
0.742
LOC115405002
pre-B-cell leukemia transcription factor 1.
    
0.742
LOC115387689
pre-B-cell leukemia transcription factor 1-like.
    
0.742
ENSSFAP00005054694
annotation not available
    
0.742
ENSSFAP00005004804
Yes-associated protein 1.
    
 0.667
ENSSFAP00005003877
Homeobox B1a.
    
 0.662
hoxb1
Homeobox B1.
    
 0.662
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.646
LOC115391805
Teashirt homolog 3-like.
    
 0.646
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.