STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115402128E3 ubiquitin-protein ligase pellino homolog 2-like. (428 aa)    
Predicted Functional Partners:
ENSSFAP00005037938
annotation not available
    
 0.894
irak4
Interleukin 1 receptor associated kinase 4.
    
 0.861
traf6
TNF receptor associated factor 6.
   
 0.840
LOC115389173
Ubiquitin-conjugating enzyme E2 variant 1-like.
    
 0.818
ripk1
Receptor interacting serine/threonine kinase 1.
    
 0.742
LOC115404349
Ubiquitin-conjugating enzyme E2 N.
    
 0.694
LOC115392193
Ubiquitin-conjugating enzyme E2 N-like.
    
 0.694
ENSSFAP00005020426
annotation not available
    
 0.640
ENSSFAP00005020429
annotation not available
    
 0.640
LOC115391381
Receptor-interacting serine/threonine-protein kinase 3-like.
    
 0.640
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.