STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115387872Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like. (1048 aa)    
Predicted Functional Partners:
ppp6c
Protein phosphatase 6 catalytic subunit.
   
 0.780
LOC115382550
Serine/threonine-protein phosphatase 6 catalytic subunit-like.
   
 0.780
LOC115402091
E3 ubiquitin-protein ligase rnf146-like.
    
 0.722
RNF146
E3 ubiquitin-protein ligase rnf146-like.
    
 0.722
ENSSFAP00005004440
Axin 1.
    
 0.677
LOC115386494
Axin-2-like.
    
 0.677
ENSSFAP00005037115
annotation not available
    
 0.677
ENSSFAP00005037118
annotation not available
    
 0.677
ENSSFAP00005037122
annotation not available
    
 0.677
ENSSFAP00005007418
enoyl-CoA delta isomerase 2.
   
  0.664
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.