STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005053911Regulatory factor X, 2 (influences HLA class II expression). (734 aa)    
Predicted Functional Partners:
chek2
Checkpoint kinase 2.
   
 0.923
ENSSFAP00005052530
ATR serine/threonine kinase.
    
 
 0.882
rfxap
Regulatory factor X associated protein.
    
 0.861
rfxank
Regulatory factor X associated ankyrin containing protein.
    
 0.772
ankra2
Ankyrin repeat family A member 2.
    
 0.741
ENSSFAP00005015953
Doublecortin-like kinase 1a.
     
 0.684
ENSSFAP00005021020
Doublecortin-like kinase 1b.
     
 0.684
ENSSFAP00005010134
annotation not available
    
 
 0.615
ENSSFAP00005019618
Forkhead box J1b.
    
 
 0.615
dmtf1
Cyclin D binding myb like transcription factor 1.
    
   0.513
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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