ENSSFAP00005054276 protein (Salarias fasciatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSFAP00005054276

annotation not available (550 aa)

Predicted Functional Partners:

ENSSFAP00005041572

0.844

ENSSFAP00005035028

0.837

pla2g15

0.821

lcat

0.821

ift46

0.807

chdh

0.807

mdm2

0.783

ENSSFAP00005042036

0.746

LOC115405645

0.739

ENSSFAP00005034749

0.739

Your Current Organism:

Salarias fasciatus

NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFAP00005034749	ENSSFAP00005042036	ENSSFAP00005034749	ENSSFAP00005042036	acyl-CoA synthetase long chain family member 3a.	MDM4 regulator of p53.	0.593
ENSSFAP00005034749	ENSSFAP00005054276	ENSSFAP00005034749	ENSSFAP00005054276	acyl-CoA synthetase long chain family member 3a.	annotation not available	0.739
ENSSFAP00005034749	LOC115405645	ENSSFAP00005034749	ENSSFAP00005005178	acyl-CoA synthetase long chain family member 3a.	long-chain-fatty-acid--CoA ligase 3-like.	0.830
ENSSFAP00005034749	mdm2	ENSSFAP00005034749	ENSSFAP00005034630	acyl-CoA synthetase long chain family member 3a.	MDM2 proto-oncogene.	0.593
ENSSFAP00005035028	ENSSFAP00005041572	ENSSFAP00005035028	ENSSFAP00005041572	Ninein (GSK3B interacting protein).	Outer dense fiber of sperm tails 2a.	0.958
ENSSFAP00005035028	ENSSFAP00005054276	ENSSFAP00005035028	ENSSFAP00005054276	Ninein (GSK3B interacting protein).	annotation not available	0.837
ENSSFAP00005041572	ENSSFAP00005035028	ENSSFAP00005041572	ENSSFAP00005035028	Outer dense fiber of sperm tails 2a.	Ninein (GSK3B interacting protein).	0.958
ENSSFAP00005041572	ENSSFAP00005054276	ENSSFAP00005041572	ENSSFAP00005054276	Outer dense fiber of sperm tails 2a.	annotation not available	0.844
ENSSFAP00005042036	ENSSFAP00005034749	ENSSFAP00005042036	ENSSFAP00005034749	MDM4 regulator of p53.	acyl-CoA synthetase long chain family member 3a.	0.593
ENSSFAP00005042036	ENSSFAP00005054276	ENSSFAP00005042036	ENSSFAP00005054276	MDM4 regulator of p53.	annotation not available	0.746
ENSSFAP00005042036	LOC115405645	ENSSFAP00005042036	ENSSFAP00005005178	MDM4 regulator of p53.	long-chain-fatty-acid--CoA ligase 3-like.	0.593
ENSSFAP00005042036	mdm2	ENSSFAP00005042036	ENSSFAP00005034630	MDM4 regulator of p53.	MDM2 proto-oncogene.	0.999
ENSSFAP00005054276	ENSSFAP00005034749	ENSSFAP00005054276	ENSSFAP00005034749	annotation not available	acyl-CoA synthetase long chain family member 3a.	0.739
ENSSFAP00005054276	ENSSFAP00005035028	ENSSFAP00005054276	ENSSFAP00005035028	annotation not available	Ninein (GSK3B interacting protein).	0.837
ENSSFAP00005054276	ENSSFAP00005041572	ENSSFAP00005054276	ENSSFAP00005041572	annotation not available	Outer dense fiber of sperm tails 2a.	0.844
ENSSFAP00005054276	ENSSFAP00005042036	ENSSFAP00005054276	ENSSFAP00005042036	annotation not available	MDM4 regulator of p53.	0.746
ENSSFAP00005054276	LOC115405645	ENSSFAP00005054276	ENSSFAP00005005178	annotation not available	long-chain-fatty-acid--CoA ligase 3-like.	0.739
ENSSFAP00005054276	chdh	ENSSFAP00005054276	ENSSFAP00005020389	annotation not available	Choline dehydrogenase.	0.807
ENSSFAP00005054276	ift46	ENSSFAP00005054276	ENSSFAP00005011408	annotation not available	Intraflagellar transport 46.	0.807
ENSSFAP00005054276	lcat	ENSSFAP00005054276	ENSSFAP00005006957	annotation not available	Lecithin-cholesterol acyltransferase.	0.821