STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005056071annotation not available (281 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
   
 0.810
pold2
DNA polymerase delta 2, accessory subunit.
    
 0.780
ENSSFAP00005027740
annotation not available
    
 0.774
pold1
DNA polymerase delta 1, catalytic subunit.
   
 0.753
pold4
DNA polymerase delta 4, accessory subunit.
    
 0.744
ENSSFAP00005006069
Polymerase (DNA directed), alpha 1.
   
 0.716
ENSSFAP00005035799
annotation not available
    
  0.710
arid4b
AT-rich interaction domain 4B.
    
  0.710
LOC115398420
Survival motor neuron protein 1-like.
    
 0.708
ddx20
DEAD-box helicase 20.
   
 0.695
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.