Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T09_10291Uncharacterized protein. (51 aa)    
Predicted Functional Partners:
T09_5290
28S ribosomal protein S29, mitochondrial.
   
 
 0.796
ftt-2
14-3-3-like protein 2; Belongs to the 14-3-3 family.
   
 0.783
mRpL10
39S ribosomal protein L10, mitochondrial.
   
 
 0.778
T09_63
Uncharacterized protein.
  
 
 0.768
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
   
 
 0.767
T09_12351
28S ribosomal protein S10, mitochondrial.
   
 
 0.760
T09_13118
39S ribosomal protein L16, mitochondrial.
   
 
 0.760
T09_10144
28S ribosomal protein S2, mitochondrial.
  
 
 0.760
T09_14827
39S ribosomal protein L4, mitochondrial.
   
 
 0.758
T09_3933
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
 
 0.754
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
Server load: low (30%) [HD]