STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_7921Cleavage stimulation factor subunit 2. (263 aa)    
Predicted Functional Partners:
T09_3644
Cleavage stimulation factor subunit 1.
    
 0.952
T09_14735
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.938
T09_15125
Cleavage stimulation factor subunit 3.
  
 0.931
T09_5771
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.928
T09_1693
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.918
T09_2110
Cleavage and polyadenylation specificity factor subunit 4.
   
 0.917
T09_13165
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.906
T09_15513
Poly(A) polymerase gamma.
    
 0.885
T09_12714
Polyadenylation and cleavage factor-like protein 11.
    
 0.883
T09_13513
Pre-mRNA 3' end processing protein WDR33.
    
 0.883
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.