STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_9988Low-density lipoprotein receptor-related protein 2. (930 aa)    
Predicted Functional Partners:
T09_5796
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha.
   
    0.962
T09_3733
Low-density lipoprotein receptor-related protein 1B.
  
 
0.798
eys
Protein eyes shut.
    
 0.783
eys-2
Protein eyes shut.
    
 0.783
T09_14840
Receptor protein-tyrosine kinase.
   
 0.766
T09_11253
Phosphatidylinositide phosphatase SAC1.
    
 0.744
T09_4811
DCC-interacting protein 13-alpha.
    
 0.727
T09_6453
Intersectin-1.
    
 0.724
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.720
unc-52
Basement membrane proteoglycan.
    
0.706
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.