STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_2605ADP-ribosylation factor GTPase-activating protein 1. (427 aa)    
Predicted Functional Partners:
arf-1.2
ADP-ribosylation factor 1-like 2.
   
 0.900
T09_13673
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
   
 0.900
T09_4820
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.866
T09_10463
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2.
   
0.843
T09_5526
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1.
    
 0.841
T09_11887
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.840
T09_2643
Coatomer subunit epsilon.
   
 0.837
T09_5853
Coatomer subunit beta.
    
 0.820
T09_12216
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  0.819
cenG1A
Centaurin-gamma-1A.
     
0.790
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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