STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adat3Putative inactive tRNA-specific adenosine deaminase-like protein 3. (963 aa)    
Predicted Functional Partners:
T09_14488
tRNA-specific adenosine deaminase 2.
   
 0.996
guaD
Guanine deaminase.
   
 0.969
T09_12604
Thymidylate synthase.
  
 
 0.918
T09_7556
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
  0.789
cdd
Cytidine deaminase.
   
 0.747
dtymk
Thymidylate kinase.
    
 0.744
T09_6855
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial.
    
 0.734
wuho
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit wuho.
    
 0.711
T09_6941
Uncharacterized protein.
    
 0.697
T09_2496
Ribokinase.
  
 
 0.696
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.