STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_10184Tetratricopeptide repeat protein 28. (1786 aa)    
Predicted Functional Partners:
leo1
RNA polymerase-associated protein LEO1.
    
 0.997
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.895
T09_15118
Heat shock protein 75 kDa, mitochondrial.
  
 0.895
T09_1544
Hamartin.
  
 0.895
T09_2768
Hamartin.
  
 0.895
T09_5056
Heat shock 70 kDa protein 4L.
  
 0.871
T09_485
Trehalose-phosphatase.
  
 0.842
T09_1422
Heat shock cognate 71 kDa protein.
  
 0.842
T09_4821
Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.
  
 0.842
T09_1410
Heat shock 70 kDa protein 13.
  
 0.842
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.