STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-4139S ribosomal protein L41, mitochondrial. (121 aa)    
Predicted Functional Partners:
T09_4817
39S ribosomal protein L17, mitochondrial.
   
 
 0.998
T09_14723
Uncharacterized protein.
   
 
 0.998
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 0.998
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
   
 
 0.997
T09_13306
28S ribosomal protein S18a, mitochondrial.
   
 
 0.997
T09_13118
39S ribosomal protein L16, mitochondrial.
   
 0.997
T09_10144
28S ribosomal protein S2, mitochondrial.
   
 
 0.997
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
   
  0.997
T09_5290
28S ribosomal protein S29, mitochondrial.
    
 
 0.997
mrps-16
Putative 28S ribosomal protein S16, mitochondrial.
   
 
 0.997
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.