STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tp53Cellular tumor antigen p53. (875 aa)    
Predicted Functional Partners:
T09_9907
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
     
 0.814
T09_13177
Serine/threonine-protein kinase 4.
    
 0.812
T09_8605
B9 domain-containing protein 1.
     
 0.788
T09_12909
Coiled-coil and C2 domain-containing protein 2A.
     
 0.788
T09_12003
Uncharacterized protein.
    
 0.778
T09_8002
B9 domain-containing protein 2.
     
 0.757
T09_12170
Jouberin.
     
 0.751
bsk
Mitogen-activated protein kinase.
     
 0.740
T09_8835
Methyltransferase-like protein 22.
     
 0.707
T09_132
NAD-dependent protein deacetylase sirtuin-1.
    
 0.695
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.