STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T09_15704Structural maintenance of chromosomes protein 3; Belongs to the complex I 49 kDa subunit family. (1803 aa)    
Predicted Functional Partners:
T09_12629
Structural maintenance of chromosomes protein 1A; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.
   
0.956
T09_8033
Nipped-B protein.
   
 0.943
T09_7045
Cohesin subunit SA-1.
   
 0.941
T09_2250
Sister chromatid cohesion protein PDS5-like protein A.
   
 0.940
esco2
N-acetyltransferase ESCO2.
   
 0.929
T09_10551
Meiotic recombination protein REC8-like protein.
   
 0.899
T09_4878
Condensin complex subunit 1.
   
 0.886
T09_781
Uncharacterized protein.
   
 0.885
T09_3654
Condensin complex subunit 2.
   
 0.880
smc6
Structural maintenance of chromosomes protein 6.
   
 0.878
Your Current Organism:
Trichinella sp. T9
NCBI taxonomy Id: 181606
Other names: T. sp. T9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.